Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Rft1Q8C3B8 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm14028-201ENSMUST00000117434 479 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm24749-201ENSMUST00000157838 343 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm16570-201ENSMUST00000161951 436 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm27341-201ENSMUST00000183570 106 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm37466-201ENSMUST00000195692 652 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 AY036118-201ENSMUST00000200021 923 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm17931-201ENSMUST00000208132 634 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Rft1Q8C3B8 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.15□□□□□ -0.78
Rft1Q8C3B8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Gm14208-201ENSMUST00000119645 678 ntBASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Rft1Q8C3B8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms