Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tsen54Q8C2A2 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tsen54Q8C2A2 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tsen54Q8C2A2 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Tsen54Q8C2A2 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Tsen54Q8C2A2 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Tsen54Q8C2A2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Tsen54Q8C2A2 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm24255-201ENSMUST00000104481 128 ntBASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm25214-201ENSMUST00000104573 129 ntBASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm13350-201ENSMUST00000120519 479 ntBASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm15547-201ENSMUST00000122152 333 ntBASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm20482-202ENSMUST00000174729 825 ntBASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm27320-201ENSMUST00000184892 109 ntBASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Tsen54Q8C2A2 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gm7584-201ENSMUST00000175829 940 ntBASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gm38241-201ENSMUST00000192641 898 ntBASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gm39404-201ENSMUST00000216350 313 ntBASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tsen54Q8C2A2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.49□□□□□ -0.89
Tsen54Q8C2A2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tsen54Q8C2A2 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tsen54Q8C2A2 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Tsen54Q8C2A2 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms