Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm25766-201ENSMUST00000104101 131 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm16166-201ENSMUST00000118291 787 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm11451-201ENSMUST00000118946 630 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm24992-201ENSMUST00000157412 130 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm22138-201ENSMUST00000158748 128 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim62Q80V85 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm17877-201ENSMUST00000192578 814 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm37826-201ENSMUST00000195329 322 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm2875-201ENSMUST00000211333 360 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim62Q80V85 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim62Q80V85 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim62Q80V85 Snora73b-201ENSMUST00000083419 205 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.74□□□□□ -0.53
Trim62Q80V85 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.74□□□□□ -0.53
Trim62Q80V85 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trim62Q80V85 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.74□□□□□ -0.53
Trim62Q80V85 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim62Q80V85 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim62Q80V85 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim62Q80V85 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim62Q80V85 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim62Q80V85 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim62Q80V85 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim62Q80V85 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim62Q80V85 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim62Q80V85 Gm37905-201ENSMUST00000195310 341 ntBASIC11.73□□□□□ -0.53
Trim62Q80V85 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.73□□□□□ -0.53
Trim62Q80V85 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.73□□□□□ -0.53
Trim62Q80V85 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim62Q80V85 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.73□□□□□ -0.53
Trim62Q80V85 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim62Q80V85 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.73□□□□□ -0.53
Trim62Q80V85 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Gm10020-201ENSMUST00000081993 612 ntBASIC11.73□□□□□ -0.53
Trim62Q80V85 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trim62Q80V85 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Trim62Q80V85 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trim62Q80V85 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim62Q80V85 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.72□□□□□ -0.53
Trim62Q80V85 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trim62Q80V85 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trim62Q80V85 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim62Q80V85 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms