Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm18351-201ENSMUST00000188646 883 ntBASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm43966-201ENSMUST00000203301 612 ntBASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm45594-201ENSMUST00000211717 241 ntBASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm45696-201ENSMUST00000212088 985 ntBASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gm8111-201ENSMUST00000117659 987 ntBASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gm8302-201ENSMUST00000119217 852 ntBASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gm3329-201ENSMUST00000159873 556 ntBASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gm8492-201ENSMUST00000182375 987 ntBASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gm8531-201ENSMUST00000188319 893 ntBASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdh19Q80TF3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Gm25492-201ENSMUST00000157383 129 ntBASIC11.17□□□□□ -0.62
Pcdh19Q80TF3 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms