Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm4857-201ENSMUST00000192718 785 ntBASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Gm43184-201ENSMUST00000197247 542 ntBASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scaf4Q6PFF0 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gm13296-201ENSMUST00000117854 997 ntBASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Mir1896-201ENSMUST00000122641 81 ntBASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gm8062-201ENSMUST00000139696 444 ntBASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gm10807-201ENSMUST00000177134 795 ntBASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gm28686-201ENSMUST00000187404 609 ntBASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gm6722-201ENSMUST00000221586 390 ntBASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scaf4Q6PFF0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Scaf4Q6PFF0 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Scaf4Q6PFF0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Scaf4Q6PFF0 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Scaf4Q6PFF0 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm38151-201ENSMUST00000195085 289 ntBASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm6334-201ENSMUST00000207083 228 ntBASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Gm9368-201ENSMUST00000219348 831 ntBASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.14□□□□□ -0.63
Scaf4Q6PFF0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms