Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 n-R5s130-201ENSMUST00000178128 119 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Gm24312-201ENSMUST00000178677 119 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 n-R5s106-201ENSMUST00000179060 119 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 n-R5s118-201ENSMUST00000179887 119 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Gm19918-201ENSMUST00000194858 400 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Wbp1-209ENSMUST00000205023 716 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 AC154354.1-203ENSMUST00000225565 1364 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Gm42432-201ENSMUST00000197902 1617 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Mir291b-201ENSMUST00000104838 79 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Gm6238-201ENSMUST00000120999 465 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Gm2345-201ENSMUST00000193451 589 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Gm42617-201ENSMUST00000197640 1229 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Gm42858-201ENSMUST00000202512 1704 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd4Q6PDQ2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd4Q6PDQ2 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Gm13171-201ENSMUST00000117233 391 ntBASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Gm13326-201ENSMUST00000118730 1011 ntBASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Gm24078-201ENSMUST00000158184 103 ntBASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Gm43244-201ENSMUST00000196994 1285 ntBASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Gm10238-201ENSMUST00000089689 408 ntBASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chd4Q6PDQ2 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Chd4Q6PDQ2 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chd4Q6PDQ2 AC153380.1-201ENSMUST00000214959 2364 ntBASIC14.51□□□□□ -0.09
Chd4Q6PDQ2 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chd4Q6PDQ2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chd4Q6PDQ2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms