Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm18038-201ENSMUST00000197900 485 ntBASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm44008-201ENSMUST00000204345 412 ntBASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm270-201ENSMUST00000223010 976 ntBASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smarcd3Q6P9Z1 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm13996-201ENSMUST00000118456 430 ntBASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm28071-201ENSMUST00000190355 478 ntBASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm8913-201ENSMUST00000209491 641 ntBASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Smarcd3Q6P9Z1 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms