Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 AC158631.2-201ENSMUST00000219999 478 ntBASIC8.78□□□□□ -1
Foxc1Q61572 Gm18387-201ENSMUST00000220333 702 ntBASIC8.78□□□□□ -1
Foxc1Q61572 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Foxc1Q61572 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC8.78□□□□□ -1
Foxc1Q61572 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Foxc1Q61572 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Foxc1Q61572 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Foxc1Q61572 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC8.78□□□□□ -1
Foxc1Q61572 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Foxc1Q61572 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC8.78□□□□□ -1
Foxc1Q61572 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Foxc1Q61572 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Foxc1Q61572 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Foxc1Q61572 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
Foxc1Q61572 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
Foxc1Q61572 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Foxc1Q61572 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Foxc1Q61572 Gm13142-201ENSMUST00000117213 1453 ntBASIC8.77□□□□□ -1
Foxc1Q61572 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC8.77□□□□□ -1.01
Foxc1Q61572 AC131120.1-201ENSMUST00000217728 1617 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Foxc1Q61572 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm14028-201ENSMUST00000117434 479 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Anp32-ps-201ENSMUST00000118265 388 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm22902-201ENSMUST00000158488 302 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm8885-201ENSMUST00000189382 598 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Gstp-ps-201ENSMUST00000195526 631 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm42937-201ENSMUST00000197360 752 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm8952-201ENSMUST00000206828 1102 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 AC164612.2-201ENSMUST00000215737 719 ntTSL 5 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Foxc1Q61572 CT010505.1-201ENSMUST00000227026 396 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 AC116487.1-201ENSMUST00000227033 339 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 AC164302.1-201ENSMUST00000227036 433 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Vmn1r89-206ENSMUST00000227319 985 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Gm9996-201ENSMUST00000070359 913 ntBASIC8.77□□□□□ -1.01
Foxc1Q61572 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Foxc1Q61572 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Foxc1Q61572 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms