Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm16301-201ENSMUST00000161959 295 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm26532-201ENSMUST00000180630 690 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm3052-201ENSMUST00000186409 829 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Matn2-203ENSMUST00000226766 3252 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm45110-201ENSMUST00000205704 1402 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 H2-Pb-201ENSMUST00000172731 531 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 AC155293.1-201ENSMUST00000219793 1026 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Cass4-204ENSMUST00000228775 2629 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm8661-201ENSMUST00000118688 992 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm9578-201ENSMUST00000182354 753 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm28391-201ENSMUST00000185202 379 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm29528-201ENSMUST00000186699 379 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm29526-201ENSMUST00000187217 379 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col12a1Q60847 CT009713.2-201ENSMUST00000225532 1149 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Gm45663-201ENSMUST00000210429 1632 ntBASIC10.87□□□□□ -0.67
Col12a1Q60847 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Col12a1Q60847 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Col12a1Q60847 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm12481-201ENSMUST00000102482 297 ntBASIC10.86□□□□□ -0.67
Col12a1Q60847 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm13215-201ENSMUST00000117559 472 ntBASIC10.86□□□□□ -0.67
Col12a1Q60847 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Col12a1Q60847 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm18783-201ENSMUST00000220465 1151 ntBASIC10.86□□□□□ -0.67
Col12a1Q60847 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm37036-201ENSMUST00000192836 2506 ntBASIC10.86□□□□□ -0.67
Col12a1Q60847 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm16439-201ENSMUST00000100687 564 ntBASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm14231-201ENSMUST00000120090 592 ntBASIC10.86□□□□□ -0.67
Col12a1Q60847 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm23899-201ENSMUST00000158112 90 ntBASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm37486-201ENSMUST00000195663 405 ntBASIC10.86□□□□□ -0.67
Col12a1Q60847 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC10.86□□□□□ -0.67
Col12a1Q60847 AC130217.1-201ENSMUST00000224146 909 ntBASIC10.86□□□□□ -0.67
Col12a1Q60847 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col12a1Q60847 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms