Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Gm12579-201ENSMUST00000118040 783 ntBASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Gm13611-201ENSMUST00000118269 318 ntBASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Gm15432-201ENSMUST00000121106 195 ntBASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Nsd1-205ENSMUST00000224693 852 ntBASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Syne3Q4FZC9 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Gm14193-201ENSMUST00000105067 153 ntBASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Gm23699-201ENSMUST00000158835 135 ntBASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Gm19353-201ENSMUST00000184561 445 ntBASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Gm18827-201ENSMUST00000188341 790 ntBASIC12.04□□□□□ -0.48
Syne3Q4FZC9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Syne3Q4FZC9 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms