Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm5190-201ENSMUST00000192434 357 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm19918-201ENSMUST00000194858 400 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 AC118639.1-202ENSMUST00000226957 653 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Fam196aQ3USH1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Gm11540-201ENSMUST00000117457 780 ntBASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Gm27826-201ENSMUST00000175282 255 ntBASIC11.46□□□□□ -0.57
Fam196aQ3USH1 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 AC134913.2-201ENSMUST00000225017 771 ntBASIC11.46□□□□□ -0.57
Fam196aQ3USH1 AC129217.1-201ENSMUST00000225181 642 ntBASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Fam196aQ3USH1 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Fam196aQ3USH1 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Gm14006-201ENSMUST00000122132 981 ntBASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Gm18733-202ENSMUST00000174447 401 ntBASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Gm5808-201ENSMUST00000178090 357 ntBASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Gm37723-201ENSMUST00000194480 565 ntBASIC11.45□□□□□ -0.58
Fam196aQ3USH1 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms