Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Gm13296-201ENSMUST00000117854 997 ntBASIC12.03□□□□□ -0.48
Trim43aQ3TL54 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Gm37466-201ENSMUST00000195692 652 ntBASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Gm9797-202ENSMUST00000218003 294 ntBASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim43aQ3TL54 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim43aQ3TL54 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gm7150-201ENSMUST00000122032 981 ntBASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gm8343-201ENSMUST00000182705 994 ntBASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim43aQ3TL54 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Gm22133-201ENSMUST00000102082 109 ntBASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Gm12997-201ENSMUST00000120207 640 ntBASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.01□□□□□ -0.49
Trim43aQ3TL54 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms