Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Tff1Q08423 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Tff1Q08423 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Tff1Q08423 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.43□□□□□ -0.9
Tff1Q08423 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Tff1Q08423 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tff1Q08423 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Tff1Q08423 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Tff1Q08423 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Tff1Q08423 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Tff1Q08423 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Tff1Q08423 Gm11511-201ENSMUST00000118146 540 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Gm15711-201ENSMUST00000118889 535 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Selenot-ps-201ENSMUST00000119098 593 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Gm11450-201ENSMUST00000121144 333 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Gm19353-201ENSMUST00000184561 445 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Gm28937-201ENSMUST00000185413 695 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Tff1Q08423 Gm29400-201ENSMUST00000187208 695 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Gm28662-201ENSMUST00000188446 695 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Gm28251-201ENSMUST00000188835 695 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.42□□□□□ -0.9
Tff1Q08423 Gm37666-201ENSMUST00000194110 866 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Gm37318-201ENSMUST00000194325 695 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Gm38017-201ENSMUST00000194768 695 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Gm37287-201ENSMUST00000195449 695 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Gm37793-201ENSMUST00000195548 695 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.42□□□□□ -0.9
Tff1Q08423 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.42□□□□□ -0.9
Tff1Q08423 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.42□□□□□ -0.9
Tff1Q08423 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.42□□□□□ -0.9
Tff1Q08423 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Tff1Q08423 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.42□□□□□ -0.9
Tff1Q08423 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Tff1Q08423 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Tff1Q08423 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Tff1Q08423 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
Tff1Q08423 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tff1Q08423 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Tff1Q08423 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tff1Q08423 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Tff1Q08423 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms