Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sox9Q04887 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sox9Q04887 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sox9Q04887 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox9Q04887 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox9Q04887 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.76□□□□□ -0.53
Sox9Q04887 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.76□□□□□ -0.53
Sox9Q04887 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Gm12345-201ENSMUST00000119288 898 ntBASIC11.76□□□□□ -0.53
Sox9Q04887 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.76□□□□□ -0.53
Sox9Q04887 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.76□□□□□ -0.53
Sox9Q04887 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11.76□□□□□ -0.53
Sox9Q04887 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.76□□□□□ -0.53
Sox9Q04887 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.76□□□□□ -0.53
Sox9Q04887 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC11.76□□□□□ -0.53
Sox9Q04887 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Sox9Q04887 Gm5650-201ENSMUST00000209641 598 ntBASIC11.76□□□□□ -0.53
Sox9Q04887 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox9Q04887 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.76□□□□□ -0.53
Sox9Q04887 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Sox9Q04887 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox9Q04887 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC11.76□□□□□ -0.53
Sox9Q04887 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Sox9Q04887 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox9Q04887 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox9Q04887 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Sox9Q04887 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.76□□□□□ -0.53
Sox9Q04887 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.76□□□□□ -0.53
Sox9Q04887 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.76□□□□□ -0.53
Sox9Q04887 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox9Q04887 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox9Q04887 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Gm6755-201ENSMUST00000100598 864 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm6740-201ENSMUST00000100617 864 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Sox9Q04887 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.75□□□□□ -0.53
Sox9Q04887 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Sox9Q04887 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Sox9Q04887 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox9Q04887 Gm23647-201ENSMUST00000175042 109 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm20694-201ENSMUST00000176943 404 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Rn5s-201ENSMUST00000177555 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm22109-201ENSMUST00000177995 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 Gm22291-201ENSMUST00000178027 119 ntBASIC11.75□□□□□ -0.53
Sox9Q04887 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms