Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcc1P97496 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Smarcc1P97496 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Smarcc1P97496 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.21□□□□□ -0.14
Smarcc1P97496 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcc1P97496 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.2□□□□□ -0.14
Smarcc1P97496 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcc1P97496 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarcc1P97496 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.2□□□□□ -0.14
Smarcc1P97496 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm14113-201ENSMUST00000121399 976 ntBASIC14.2□□□□□ -0.14
Smarcc1P97496 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm19246-201ENSMUST00000173599 255 ntBASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm17796-201ENSMUST00000189015 1213 ntBASIC14.2□□□□□ -0.14
Smarcc1P97496 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcc1P97496 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm10020-201ENSMUST00000081993 612 ntBASIC14.2□□□□□ -0.14
Smarcc1P97496 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcc1P97496 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcc1P97496 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.2□□□□□ -0.14
Smarcc1P97496 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcc1P97496 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC14.2□□□□□ -0.14
Smarcc1P97496 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smarcc1P97496 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcc1P97496 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm23255-201ENSMUST00000102244 110 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm23769-201ENSMUST00000104441 121 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm1826-201ENSMUST00000118646 1162 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm15982-201ENSMUST00000121681 554 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm13827-201ENSMUST00000148801 372 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm7985-201ENSMUST00000183329 981 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm7238-201ENSMUST00000206467 973 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm9204-201ENSMUST00000212641 947 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcc1P97496 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcc1P97496 AC154589.2-201ENSMUST00000228847 251 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 Gm9244-201ENSMUST00000056767 2129 ntBASIC14.19□□□□□ -0.14
Smarcc1P97496 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcc1P97496 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcc1P97496 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms