Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.5□□□□□ -0.89
Npas1P97459 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Gm43307-201ENSMUST00000199465 2371 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.5□□□□□ -0.89
Npas1P97459 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.5□□□□□ -0.89
Npas1P97459 Gm42826-201ENSMUST00000197548 2639 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Gm25214-201ENSMUST00000104573 129 ntBASIC9.5□□□□□ -0.89
Npas1P97459 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Npas1P97459 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.5□□□□□ -0.89
Npas1P97459 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC9.5□□□□□ -0.89
Npas1P97459 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.5□□□□□ -0.89
Npas1P97459 Gm27731-201ENSMUST00000185192 107 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.5□□□□□ -0.89
Npas1P97459 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Gm19963-201ENSMUST00000208413 1255 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.5□□□□□ -0.89
Npas1P97459 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.5□□□□□ -0.89
Npas1P97459 AC113031.8-201ENSMUST00000227856 631 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Npas1P97459 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.5□□□□□ -0.89
Npas1P97459 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC9.49□□□□□ -0.89
Npas1P97459 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.49□□□□□ -0.89
Npas1P97459 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.49□□□□□ -0.89
Npas1P97459 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9.49□□□□□ -0.89
Npas1P97459 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Npas1P97459 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Gm11531-201ENSMUST00000117614 555 ntBASIC9.49□□□□□ -0.89
Npas1P97459 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.49□□□□□ -0.89
Npas1P97459 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Npas1P97459 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.49□□□□□ -0.89
Npas1P97459 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.49□□□□□ -0.89
Npas1P97459 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Npas1P97459 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC9.49□□□□□ -0.89
Npas1P97459 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Npas1P97459 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.49□□□□□ -0.89
Npas1P97459 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Npas1P97459 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Npas1P97459 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Npas1P97459 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms