Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp9xP70398 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.39□□□□□ -0.91
Usp9xP70398 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC9.39□□□□□ -0.91
Usp9xP70398 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Usp9xP70398 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Usp9xP70398 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC9.38□□□□□ -0.91
Usp9xP70398 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC9.38□□□□□ -0.91
Usp9xP70398 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Usp9xP70398 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Usp9xP70398 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.38□□□□□ -0.91
Usp9xP70398 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC9.38□□□□□ -0.91
Usp9xP70398 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC9.38□□□□□ -0.91
Usp9xP70398 Gm3926-201ENSMUST00000223378 1123 ntBASIC9.38□□□□□ -0.91
Usp9xP70398 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Usp9xP70398 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Usp9xP70398 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.38□□□□□ -0.91
Usp9xP70398 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.38□□□□□ -0.91
Usp9xP70398 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 AC151836.1-201ENSMUST00000228730 1637 ntBASIC9.38□□□□□ -0.91
Usp9xP70398 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Usp9xP70398 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.38□□□□□ -0.91
Usp9xP70398 Gm11960-201ENSMUST00000122068 925 ntBASIC9.38□□□□□ -0.91
Usp9xP70398 Gm14699-201ENSMUST00000122340 228 ntBASIC9.38□□□□□ -0.91
Usp9xP70398 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC9.38□□□□□ -0.91
Usp9xP70398 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Gm7589-201ENSMUST00000085631 534 ntBASIC9.38□□□□□ -0.91
Usp9xP70398 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Usp9xP70398 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Usp9xP70398 Gm17836-201ENSMUST00000191976 1302 ntBASIC9.38□□□□□ -0.91
Usp9xP70398 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Usp9xP70398 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Usp9xP70398 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Usp9xP70398 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Mir705-201ENSMUST00000102058 82 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.37□□□□□ -0.91
Usp9xP70398 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Gm12435-201ENSMUST00000118949 1016 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Gm24140-201ENSMUST00000122773 326 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.37□□□□□ -0.91
Usp9xP70398 Gm5526-201ENSMUST00000153604 423 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Gm38349-201ENSMUST00000195732 462 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Gm44304-201ENSMUST00000200509 145 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Wbp1-209ENSMUST00000205023 716 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Gm45258-201ENSMUST00000210042 853 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Gm18164-201ENSMUST00000213769 927 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Gm18166-201ENSMUST00000215557 927 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Usp9xP70398 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Usp9xP70398 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.37□□□□□ -0.91
Usp9xP70398 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Usp9xP70398 Erich3-203ENSMUST00000189969 3460 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms