Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.15□□□□□ -0.62
Shox2P70390 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.15□□□□□ -0.62
Shox2P70390 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.15□□□□□ -0.62
Shox2P70390 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.15□□□□□ -0.62
Shox2P70390 Gm7940-201ENSMUST00000218195 769 ntBASIC11.15□□□□□ -0.62
Shox2P70390 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.15□□□□□ -0.62
Shox2P70390 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.15□□□□□ -0.62
Shox2P70390 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC11.15□□□□□ -0.62
Shox2P70390 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Shox2P70390 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Shox2P70390 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Shox2P70390 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
Shox2P70390 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Shox2P70390 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Cdh18-207ENSMUST00000226693 2165 ntBASIC11.14□□□□□ -0.63
Shox2P70390 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Shox2P70390 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Shox2P70390 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Shox2P70390 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Shox2P70390 AC131029.1-201ENSMUST00000226391 2929 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Gm26286-201ENSMUST00000104166 134 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.14□□□□□ -0.63
Shox2P70390 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Shox2P70390 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.14□□□□□ -0.63
Shox2P70390 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.14□□□□□ -0.63
Shox2P70390 Gm23984-201ENSMUST00000157139 203 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Gm29649-201ENSMUST00000185649 419 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.14□□□□□ -0.63
Shox2P70390 Gm42867-201ENSMUST00000202995 469 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.14□□□□□ -0.63
Shox2P70390 Gm18165-201ENSMUST00000217426 928 ntBASIC11.14□□□□□ -0.63
Shox2P70390 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.14□□□□□ -0.63
Shox2P70390 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.14□□□□□ -0.63
Shox2P70390 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Shox2P70390 Gm2423-201ENSMUST00000074863 733 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Snora73a-201ENSMUST00000082453 205 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Gm10748-202ENSMUST00000194396 2379 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Gm8036-201ENSMUST00000118089 1718 ntBASIC11.14□□□□□ -0.63
Shox2P70390 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Shox2P70390 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Shox2P70390 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Shox2P70390 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Shox2P70390 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
Shox2P70390 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Shox2P70390 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC11.13□□□□□ -0.63
Shox2P70390 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.13□□□□□ -0.63
Shox2P70390 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.13□□□□□ -0.63
Shox2P70390 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Shox2P70390 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.13□□□□□ -0.63
Shox2P70390 Gm38117-201ENSMUST00000194653 939 ntBASIC11.13□□□□□ -0.63
Shox2P70390 Gm42859-201ENSMUST00000199572 193 ntBASIC11.13□□□□□ -0.63
Shox2P70390 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms