Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Pdlim4P70271 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.47□□□□□ -0.89
Pdlim4P70271 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm10051-201ENSMUST00000145209 414 ntBASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.47□□□□□ -0.89
Pdlim4P70271 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm10807-201ENSMUST00000177134 795 ntBASIC9.47□□□□□ -0.89
Pdlim4P70271 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm12407-201ENSMUST00000180219 324 ntBASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm18827-201ENSMUST00000188341 790 ntBASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm9555-201ENSMUST00000200908 583 ntBASIC9.47□□□□□ -0.89
Pdlim4P70271 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.47□□□□□ -0.89
Pdlim4P70271 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm4978-201ENSMUST00000071565 801 ntBASIC9.47□□□□□ -0.89
Pdlim4P70271 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.47□□□□□ -0.89
Pdlim4P70271 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 Erich3-203ENSMUST00000189969 3460 ntBASIC9.47□□□□□ -0.89
Pdlim4P70271 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Pdlim4P70271 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Pdlim4P70271 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Pdlim4P70271 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Pdlim4P70271 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Pdlim4P70271 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Pdlim4P70271 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Pdlim4P70271 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Pdlim4P70271 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Pdlim4P70271 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Pdlim4P70271 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Pdlim4P70271 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Pdlim4P70271 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Pdlim4P70271 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Pdlim4P70271 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms