Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Traf6P70196 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.24□□□□□ -0.61
Traf6P70196 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Traf6P70196 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.24□□□□□ -0.61
Traf6P70196 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.24□□□□□ -0.61
Traf6P70196 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.24□□□□□ -0.61
Traf6P70196 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Traf6P70196 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Traf6P70196 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.24□□□□□ -0.61
Traf6P70196 Gm11500-201ENSMUST00000118237 601 ntBASIC11.24□□□□□ -0.61
Traf6P70196 Gm15711-201ENSMUST00000118889 535 ntBASIC11.24□□□□□ -0.61
Traf6P70196 Gm12997-201ENSMUST00000120207 640 ntBASIC11.24□□□□□ -0.61
Traf6P70196 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.24□□□□□ -0.61
Traf6P70196 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.24□□□□□ -0.61
Traf6P70196 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Traf6P70196 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC11.24□□□□□ -0.61
Traf6P70196 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.24□□□□□ -0.61
Traf6P70196 Gm45433-201ENSMUST00000209386 247 ntBASIC11.24□□□□□ -0.61
Traf6P70196 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.24□□□□□ -0.61
Traf6P70196 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Traf6P70196 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.24□□□□□ -0.61
Traf6P70196 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.24□□□□□ -0.61
Traf6P70196 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.24□□□□□ -0.61
Traf6P70196 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Traf6P70196 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Traf6P70196 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.24□□□□□ -0.61
Traf6P70196 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Traf6P70196 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Traf6P70196 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Traf6P70196 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Traf6P70196 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Traf6P70196 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
Traf6P70196 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Traf6P70196 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.23□□□□□ -0.61
Traf6P70196 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.23□□□□□ -0.61
Traf6P70196 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Traf6P70196 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.23□□□□□ -0.61
Traf6P70196 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Traf6P70196 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.23□□□□□ -0.61
Traf6P70196 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.23□□□□□ -0.61
Traf6P70196 Gm20495-201ENSMUST00000173902 235 ntBASIC11.23□□□□□ -0.61
Traf6P70196 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.23□□□□□ -0.61
Traf6P70196 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC11.23□□□□□ -0.61
Traf6P70196 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Traf6P70196 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.23□□□□□ -0.61
Traf6P70196 Rps4l-202ENSMUST00000204242 789 ntBASIC11.23□□□□□ -0.61
Traf6P70196 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.23□□□□□ -0.61
Traf6P70196 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.23□□□□□ -0.61
Traf6P70196 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.23□□□□□ -0.61
Traf6P70196 Gm6562-201ENSMUST00000221903 464 ntBASIC11.23□□□□□ -0.61
Traf6P70196 Gm270-201ENSMUST00000223010 976 ntBASIC11.23□□□□□ -0.61
Traf6P70196 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Gm26448-201ENSMUST00000082446 203 ntBASIC11.23□□□□□ -0.61
Traf6P70196 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Traf6P70196 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Traf6P70196 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms