Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.53□□□□□ -0.4
Hmgb1P63158 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmgb1P63158 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hmgb1P63158 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Hmgb1P63158 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgb1P63158 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgb1P63158 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgb1P63158 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgb1P63158 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgb1P63158 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgb1P63158 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgb1P63158 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.52□□□□□ -0.4
Hmgb1P63158 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgb1P63158 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.52□□□□□ -0.4
Hmgb1P63158 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hmgb1P63158 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hmgb1P63158 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmgb1P63158 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hmgb1P63158 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hmgb1P63158 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.52□□□□□ -0.41
Hmgb1P63158 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Hmgb1P63158 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hmgb1P63158 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hmgb1P63158 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.52□□□□□ -0.41
Hmgb1P63158 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.52□□□□□ -0.41
Hmgb1P63158 Gm22846-201ENSMUST00000157706 270 ntBASIC12.52□□□□□ -0.41
Hmgb1P63158 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.52□□□□□ -0.41
Hmgb1P63158 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.52□□□□□ -0.41
Hmgb1P63158 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.52□□□□□ -0.41
Hmgb1P63158 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.52□□□□□ -0.41
Hmgb1P63158 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.52□□□□□ -0.41
Hmgb1P63158 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Hmgb1P63158 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC12.52□□□□□ -0.41
Hmgb1P63158 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hmgb1P63158 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmgb1P63158 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.51□□□□□ -0.41
Hmgb1P63158 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm4857-201ENSMUST00000192718 785 ntBASIC12.51□□□□□ -0.41
Hmgb1P63158 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.51□□□□□ -0.41
Hmgb1P63158 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.51□□□□□ -0.41
Hmgb1P63158 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.51□□□□□ -0.41
Hmgb1P63158 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hmgb1P63158 Gm21811-201ENSMUST00000096485 930 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms