Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.34□□□□□ -0.43
SqleP52019 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.34□□□□□ -0.43
SqleP52019 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SqleP52019 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SqleP52019 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SqleP52019 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SqleP52019 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.34□□□□□ -0.43
SqleP52019 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.34□□□□□ -0.43
SqleP52019 Mir1249-201ENSMUST00000116791 98 ntBASIC12.34□□□□□ -0.43
SqleP52019 Gm11952-201ENSMUST00000121172 821 ntBASIC12.34□□□□□ -0.43
SqleP52019 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.34□□□□□ -0.43
SqleP52019 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SqleP52019 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SqleP52019 Gm18552-201ENSMUST00000187425 538 ntBASIC12.34□□□□□ -0.43
SqleP52019 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.34□□□□□ -0.43
SqleP52019 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SqleP52019 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.34□□□□□ -0.43
SqleP52019 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC12.34□□□□□ -0.43
SqleP52019 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SqleP52019 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SqleP52019 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.34□□□□□ -0.43
SqleP52019 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.34□□□□□ -0.43
SqleP52019 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.34□□□□□ -0.43
SqleP52019 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SqleP52019 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
SqleP52019 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SqleP52019 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.43
SqleP52019 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.33□□□□□ -0.44
SqleP52019 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.33□□□□□ -0.44
SqleP52019 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SqleP52019 Gm11540-201ENSMUST00000117457 780 ntBASIC12.33□□□□□ -0.44
SqleP52019 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SqleP52019 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.33□□□□□ -0.44
SqleP52019 Gm16165-201ENSMUST00000160140 795 ntBASIC12.33□□□□□ -0.44
SqleP52019 Gm5254-201ENSMUST00000188353 977 ntBASIC12.33□□□□□ -0.44
SqleP52019 Gm2474-201ENSMUST00000195162 559 ntBASIC12.33□□□□□ -0.44
SqleP52019 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SqleP52019 AC124613.1-201ENSMUST00000198711 88 ntBASIC12.33□□□□□ -0.44
SqleP52019 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.33□□□□□ -0.44
SqleP52019 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC12.33□□□□□ -0.44
SqleP52019 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.33□□□□□ -0.44
SqleP52019 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SqleP52019 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SqleP52019 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SqleP52019 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SqleP52019 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SqleP52019 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.32□□□□□ -0.44
SqleP52019 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.32□□□□□ -0.44
SqleP52019 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SqleP52019 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.32□□□□□ -0.44
SqleP52019 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SqleP52019 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SqleP52019 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
SqleP52019 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms