Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
TubP50586 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TubP50586 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TubP50586 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.63□□□□□ -0.55
TubP50586 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TubP50586 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TubP50586 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TubP50586 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TubP50586 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.63□□□□□ -0.55
TubP50586 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TubP50586 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TubP50586 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.63□□□□□ -0.55
TubP50586 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TubP50586 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
TubP50586 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
TubP50586 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.62□□□□□ -0.55
TubP50586 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
TubP50586 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.62□□□□□ -0.55
TubP50586 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.62□□□□□ -0.55
TubP50586 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
TubP50586 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TubP50586 Gm14395-201ENSMUST00000120494 563 ntBASIC11.62□□□□□ -0.55
TubP50586 Gm22846-201ENSMUST00000157706 270 ntBASIC11.62□□□□□ -0.55
TubP50586 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TubP50586 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.62□□□□□ -0.55
TubP50586 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.62□□□□□ -0.55
TubP50586 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.62□□□□□ -0.55
TubP50586 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.62□□□□□ -0.55
TubP50586 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.62□□□□□ -0.55
TubP50586 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
TubP50586 Snora73b-201ENSMUST00000083419 205 ntBASIC11.62□□□□□ -0.55
TubP50586 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
TubP50586 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
TubP50586 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TubP50586 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TubP50586 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TubP50586 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
TubP50586 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.61□□□□□ -0.55
TubP50586 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
TubP50586 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.61□□□□□ -0.55
TubP50586 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TubP50586 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.61□□□□□ -0.55
TubP50586 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Gm3508-201ENSMUST00000186012 792 ntBASIC11.61□□□□□ -0.55
TubP50586 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.61□□□□□ -0.55
TubP50586 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.61□□□□□ -0.55
TubP50586 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.61□□□□□ -0.55
TubP50586 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TubP50586 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.61□□□□□ -0.55
TubP50586 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.61□□□□□ -0.55
TubP50586 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.61□□□□□ -0.55
TubP50586 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TubP50586 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.6□□□□□ -0.55
TubP50586 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TubP50586 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TubP50586 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TubP50586 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TubP50586 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TubP50586 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TubP50586 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TubP50586 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TubP50586 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TubP50586 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.6□□□□□ -0.55
TubP50586 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms