Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LtbrP50284 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LtbrP50284 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LtbrP50284 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.53□□□□□ -0.24
LtbrP50284 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.53□□□□□ -0.24
LtbrP50284 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.53□□□□□ -0.24
LtbrP50284 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.53□□□□□ -0.24
LtbrP50284 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LtbrP50284 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.53□□□□□ -0.24
LtbrP50284 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Gm24809-201ENSMUST00000175318 271 ntBASIC13.53□□□□□ -0.24
LtbrP50284 Gm43163-201ENSMUST00000196571 442 ntBASIC13.53□□□□□ -0.24
LtbrP50284 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.53□□□□□ -0.24
LtbrP50284 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.53□□□□□ -0.24
LtbrP50284 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.53□□□□□ -0.24
LtbrP50284 AC121357.1-201ENSMUST00000227365 608 ntBASIC13.53□□□□□ -0.24
LtbrP50284 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 AC151904.4-201ENSMUST00000219868 1319 ntBASIC13.53□□□□□ -0.24
LtbrP50284 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC13.53□□□□□ -0.24
LtbrP50284 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
LtbrP50284 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LtbrP50284 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.53□□□□□ -0.24
LtbrP50284 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.53□□□□□ -0.24
LtbrP50284 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.53□□□□□ -0.24
LtbrP50284 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LtbrP50284 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LtbrP50284 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.52□□□□□ -0.24
LtbrP50284 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LtbrP50284 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LtbrP50284 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LtbrP50284 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LtbrP50284 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LtbrP50284 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
LtbrP50284 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LtbrP50284 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.52□□□□□ -0.25
LtbrP50284 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC13.52□□□□□ -0.25
LtbrP50284 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
LtbrP50284 Gm25554-201ENSMUST00000158075 113 ntBASIC13.52□□□□□ -0.25
LtbrP50284 Gm3329-201ENSMUST00000159873 556 ntBASIC13.52□□□□□ -0.25
LtbrP50284 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC13.52□□□□□ -0.25
LtbrP50284 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC13.52□□□□□ -0.25
LtbrP50284 Gm6644-201ENSMUST00000186507 951 ntBASIC13.52□□□□□ -0.25
LtbrP50284 Gm17796-201ENSMUST00000189015 1213 ntBASIC13.52□□□□□ -0.25
LtbrP50284 Gm36966-201ENSMUST00000192217 413 ntBASIC13.52□□□□□ -0.25
LtbrP50284 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LtbrP50284 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
LtbrP50284 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.52□□□□□ -0.25
LtbrP50284 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Mir326-201ENSMUST00000083637 95 ntBASIC13.52□□□□□ -0.25
LtbrP50284 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.52□□□□□ -0.25
LtbrP50284 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.52□□□□□ -0.25
LtbrP50284 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LtbrP50284 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LtbrP50284 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LtbrP50284 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
LtbrP50284 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.52□□□□□ -0.25
LtbrP50284 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.52□□□□□ -0.25
LtbrP50284 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LtbrP50284 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
LtbrP50284 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LtbrP50284 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LtbrP50284 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LtbrP50284 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LtbrP50284 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LtbrP50284 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
LtbrP50284 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.51□□□□□ -0.25
LtbrP50284 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LtbrP50284 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.51□□□□□ -0.25
LtbrP50284 AC122539.3-201ENSMUST00000218355 1431 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms