Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.67□□□□□ -0.7
Sox6P40645 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Sox6P40645 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.67□□□□□ -0.7
Sox6P40645 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.67□□□□□ -0.7
Sox6P40645 Gm2553-201ENSMUST00000215986 605 ntBASIC10.67□□□□□ -0.7
Sox6P40645 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox6P40645 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Gm5705-201ENSMUST00000066241 711 ntBASIC10.67□□□□□ -0.7
Sox6P40645 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.67□□□□□ -0.7
Sox6P40645 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sox6P40645 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.67□□□□□ -0.7
Sox6P40645 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Sox6P40645 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.67□□□□□ -0.7
Sox6P40645 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sox6P40645 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.67□□□□□ -0.7
Sox6P40645 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox6P40645 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Sox6P40645 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.67□□□□□ -0.7
Sox6P40645 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.66□□□□□ -0.7
Sox6P40645 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.66□□□□□ -0.7
Sox6P40645 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Gm9136-201ENSMUST00000193368 454 ntBASIC10.66□□□□□ -0.7
Sox6P40645 Gm37666-201ENSMUST00000194110 866 ntBASIC10.66□□□□□ -0.7
Sox6P40645 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Gm26448-201ENSMUST00000082446 203 ntBASIC10.66□□□□□ -0.7
Sox6P40645 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Sox6P40645 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox6P40645 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Sox6P40645 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sox6P40645 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sox6P40645 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Sox6P40645 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
Sox6P40645 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.65□□□□□ -0.7
Sox6P40645 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Sox6P40645 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Gm12380-201ENSMUST00000119012 544 ntBASIC10.65□□□□□ -0.7
Sox6P40645 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Sox6P40645 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sox6P40645 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms