Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Fen1P39749 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.4□□□□□ -0.58
Fen1P39749 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Fen1P39749 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.4□□□□□ -0.58
Fen1P39749 Gm24255-201ENSMUST00000104481 128 ntBASIC11.4□□□□□ -0.58
Fen1P39749 Gm15004-201ENSMUST00000119192 630 ntBASIC11.4□□□□□ -0.58
Fen1P39749 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.4□□□□□ -0.58
Fen1P39749 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.4□□□□□ -0.58
Fen1P39749 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Fen1P39749 Gm3096-201ENSMUST00000185770 364 ntBASIC11.4□□□□□ -0.58
Fen1P39749 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.4□□□□□ -0.58
Fen1P39749 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.4□□□□□ -0.58
Fen1P39749 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.4□□□□□ -0.58
Fen1P39749 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.4□□□□□ -0.58
Fen1P39749 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.4□□□□□ -0.58
Fen1P39749 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.4□□□□□ -0.59
Fen1P39749 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.4□□□□□ -0.59
Fen1P39749 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.4□□□□□ -0.59
Fen1P39749 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Fen1P39749 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Fen1P39749 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Fen1P39749 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Fen1P39749 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.4□□□□□ -0.59
Fen1P39749 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Fen1P39749 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Fen1P39749 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Fen1P39749 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.39□□□□□ -0.59
Fen1P39749 Gm12015-201ENSMUST00000117065 843 ntBASIC11.39□□□□□ -0.59
Fen1P39749 Gm11511-201ENSMUST00000118146 540 ntBASIC11.39□□□□□ -0.59
Fen1P39749 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.39□□□□□ -0.59
Fen1P39749 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.39□□□□□ -0.59
Fen1P39749 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.39□□□□□ -0.59
Fen1P39749 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Gm17376-201ENSMUST00000166016 84 ntBASIC11.39□□□□□ -0.59
Fen1P39749 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.39□□□□□ -0.59
Fen1P39749 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.39□□□□□ -0.59
Fen1P39749 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.39□□□□□ -0.59
Fen1P39749 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.39□□□□□ -0.59
Fen1P39749 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Rps4l-202ENSMUST00000204242 789 ntBASIC11.39□□□□□ -0.59
Fen1P39749 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Fen1P39749 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Fen1P39749 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Fen1P39749 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.39□□□□□ -0.59
Fen1P39749 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Fen1P39749 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Fen1P39749 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Fen1P39749 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Fen1P39749 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.39□□□□□ -0.59
Fen1P39749 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Fen1P39749 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.39□□□□□ -0.59
Fen1P39749 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Fen1P39749 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms