Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.65□□□□□ -0.06
Col18a1P39061 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC14.65□□□□□ -0.06
Col18a1P39061 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC14.65□□□□□ -0.06
Col18a1P39061 Defa-ps16-201ENSMUST00000121939 171 ntBASIC14.65□□□□□ -0.06
Col18a1P39061 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Col18a1P39061 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC14.65□□□□□ -0.06
Col18a1P39061 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col18a1P39061 Gm42710-201ENSMUST00000200608 985 ntBASIC14.65□□□□□ -0.06
Col18a1P39061 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC14.65□□□□□ -0.06
Col18a1P39061 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Col18a1P39061 Gm26440-201ENSMUST00000082591 129 ntBASIC14.65□□□□□ -0.06
Col18a1P39061 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.64□□□□□ -0.07
Col18a1P39061 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Col18a1P39061 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Col18a1P39061 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Gm6783-201ENSMUST00000120916 1437 ntBASIC14.64□□□□□ -0.07
Col18a1P39061 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.64□□□□□ -0.07
Col18a1P39061 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC14.64□□□□□ -0.07
Col18a1P39061 Gm12774-201ENSMUST00000117881 416 ntBASIC14.64□□□□□ -0.07
Col18a1P39061 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC14.64□□□□□ -0.07
Col18a1P39061 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC14.64□□□□□ -0.07
Col18a1P39061 AC102569.1-201ENSMUST00000221563 685 ntBASIC14.64□□□□□ -0.07
Col18a1P39061 Gm18749-201ENSMUST00000222410 692 ntBASIC14.64□□□□□ -0.07
Col18a1P39061 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col18a1P39061 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Gm44664-201ENSMUST00000206841 1786 ntBASIC14.64□□□□□ -0.07
Col18a1P39061 Fut8-202ENSMUST00000171770 2765 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Gm43127-201ENSMUST00000195890 2789 ntBASIC14.64□□□□□ -0.07
Col18a1P39061 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col18a1P39061 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Gm24981-201ENSMUST00000104459 132 ntBASIC14.63□□□□□ -0.07
Col18a1P39061 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Col18a1P39061 Gm16518-201ENSMUST00000117960 508 ntBASIC14.63□□□□□ -0.07
Col18a1P39061 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC14.63□□□□□ -0.07
Col18a1P39061 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC14.63□□□□□ -0.07
Col18a1P39061 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Gm7672-201ENSMUST00000180915 872 ntBASIC14.63□□□□□ -0.07
Col18a1P39061 Gm28180-201ENSMUST00000189608 722 ntBASIC14.63□□□□□ -0.07
Col18a1P39061 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC14.63□□□□□ -0.07
Col18a1P39061 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Gm8174-201ENSMUST00000064353 1001 ntBASIC14.63□□□□□ -0.07
Col18a1P39061 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC14.63□□□□□ -0.07
Col18a1P39061 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC14.63□□□□□ -0.07
Col18a1P39061 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Col18a1P39061 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.63□□□□□ -0.07
Col18a1P39061 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Col18a1P39061 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col18a1P39061 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC14.63□□□□□ -0.07
Col18a1P39061 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Col18a1P39061 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms