Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Hoxc6P10629 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Hoxc6P10629 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc6P10629 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc6P10629 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Gm11952-201ENSMUST00000121172 821 ntBASIC12.57□□□□□ -0.4
Hoxc6P10629 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.57□□□□□ -0.4
Hoxc6P10629 Mir432-201ENSMUST00000157230 75 ntBASIC12.57□□□□□ -0.4
Hoxc6P10629 Gm11942-201ENSMUST00000180255 345 ntBASIC12.57□□□□□ -0.4
Hoxc6P10629 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.57□□□□□ -0.4
Hoxc6P10629 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc6P10629 Gm43966-201ENSMUST00000203301 612 ntBASIC12.57□□□□□ -0.4
Hoxc6P10629 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc6P10629 Gm2448-201ENSMUST00000207080 559 ntBASIC12.57□□□□□ -0.4
Hoxc6P10629 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc6P10629 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.57□□□□□ -0.4
Hoxc6P10629 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.57□□□□□ -0.4
Hoxc6P10629 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc6P10629 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxc6P10629 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Hoxc6P10629 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxc6P10629 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc6P10629 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.56□□□□□ -0.4
Hoxc6P10629 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxc6P10629 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxc6P10629 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hoxc6P10629 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.56□□□□□ -0.4
Hoxc6P10629 Gm13204-201ENSMUST00000120110 821 ntBASIC12.56□□□□□ -0.4
Hoxc6P10629 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.56□□□□□ -0.4
Hoxc6P10629 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.56□□□□□ -0.4
Hoxc6P10629 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Gm16165-201ENSMUST00000160140 795 ntBASIC12.56□□□□□ -0.4
Hoxc6P10629 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxc6P10629 Gm24954-201ENSMUST00000178831 110 ntBASIC12.56□□□□□ -0.4
Hoxc6P10629 Gm42867-201ENSMUST00000202995 469 ntBASIC12.56□□□□□ -0.4
Hoxc6P10629 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxc6P10629 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.56□□□□□ -0.4
Hoxc6P10629 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.56□□□□□ -0.4
Hoxc6P10629 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxc6P10629 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxc6P10629 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc6P10629 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc6P10629 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm13094-201ENSMUST00000117930 409 ntBASIC12.55□□□□□ -0.4
Hoxc6P10629 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms