Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hoxc9P09633 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hoxc9P09633 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC14.63□□□□□ -0.07
Hoxc9P09633 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Hoxc9P09633 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Hoxc9P09633 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hoxc9P09633 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hoxc9P09633 Gm43167-201ENSMUST00000202001 1606 ntBASIC14.63□□□□□ -0.07
Hoxc9P09633 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Gm18806-201ENSMUST00000207607 1775 ntBASIC14.63□□□□□ -0.07
Hoxc9P09633 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Hoxc9P09633 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hoxc9P09633 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Gm12461-201ENSMUST00000120231 1239 ntBASIC14.63□□□□□ -0.07
Hoxc9P09633 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Gm5210-201ENSMUST00000182150 1010 ntBASIC14.63□□□□□ -0.07
Hoxc9P09633 Gm43547-201ENSMUST00000197729 328 ntBASIC14.63□□□□□ -0.07
Hoxc9P09633 Gm43610-201ENSMUST00000199117 365 ntBASIC14.63□□□□□ -0.07
Hoxc9P09633 Gm7939-201ENSMUST00000201233 1050 ntBASIC14.63□□□□□ -0.07
Hoxc9P09633 BC080696-201ENSMUST00000202858 1218 ntBASIC14.63□□□□□ -0.07
Hoxc9P09633 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC14.63□□□□□ -0.07
Hoxc9P09633 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC14.63□□□□□ -0.07
Hoxc9P09633 AC138716.2-201ENSMUST00000226670 1016 ntBASIC14.63□□□□□ -0.07
Hoxc9P09633 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hoxc9P09633 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 AC090962.2-201ENSMUST00000225064 1801 ntBASIC14.63□□□□□ -0.07
Hoxc9P09633 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hoxc9P09633 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hoxc9P09633 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC14.63□□□□□ -0.07
Hoxc9P09633 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Gm23745-201ENSMUST00000104230 125 ntBASIC14.62□□□□□ -0.07
Hoxc9P09633 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Gm27440-201ENSMUST00000184785 107 ntBASIC14.62□□□□□ -0.07
Hoxc9P09633 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Trav11n-201ENSMUST00000200113 343 ntBASIC14.62□□□□□ -0.07
Hoxc9P09633 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC14.62□□□□□ -0.07
Hoxc9P09633 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC14.62□□□□□ -0.07
Hoxc9P09633 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hoxc9P09633 Gm12912-201ENSMUST00000121596 1381 ntBASIC14.61□□□□□ -0.07
Hoxc9P09633 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc9P09633 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Hoxc9P09633 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc9P09633 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc9P09633 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc9P09633 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Hoxc9P09633 Gm1826-201ENSMUST00000118646 1162 ntBASIC14.61□□□□□ -0.07
Hoxc9P09633 Gm6758-201ENSMUST00000119643 1055 ntBASIC14.61□□□□□ -0.07
Hoxc9P09633 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC14.61□□□□□ -0.07
Hoxc9P09633 Gm22344-201ENSMUST00000122642 278 ntBASIC14.61□□□□□ -0.07
Hoxc9P09633 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hoxc9P09633 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC14.61□□□□□ -0.07
Hoxc9P09633 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Hoxc9P09633 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Hoxc9P09633 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC14.61□□□□□ -0.07
Hoxc9P09633 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Hoxc9P09633 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Hoxc9P09633 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Hoxc9P09633 Gm5340-201ENSMUST00000203733 880 ntBASIC14.61□□□□□ -0.07
Hoxc9P09633 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms