Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
CopeO89079 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CopeO89079 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.66□□□□□ -0.54
CopeO89079 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
CopeO89079 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
CopeO89079 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CopeO89079 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
CopeO89079 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.66□□□□□ -0.54
CopeO89079 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Mir7677-201ENSMUST00000184226 67 ntBASIC11.66□□□□□ -0.54
CopeO89079 Gm4857-201ENSMUST00000192718 785 ntBASIC11.66□□□□□ -0.54
CopeO89079 AA914427-201ENSMUST00000193194 1166 ntBASIC11.66□□□□□ -0.54
CopeO89079 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.66□□□□□ -0.54
CopeO89079 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.66□□□□□ -0.54
CopeO89079 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.66□□□□□ -0.54
CopeO89079 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.66□□□□□ -0.54
CopeO89079 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
CopeO89079 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.66□□□□□ -0.54
CopeO89079 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.66□□□□□ -0.54
CopeO89079 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
CopeO89079 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CopeO89079 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.66□□□□□ -0.54
CopeO89079 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CopeO89079 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.65□□□□□ -0.54
CopeO89079 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.65□□□□□ -0.54
CopeO89079 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.65□□□□□ -0.54
CopeO89079 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
CopeO89079 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
CopeO89079 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.65□□□□□ -0.54
CopeO89079 Gm11573-201ENSMUST00000119956 394 ntBASIC11.65□□□□□ -0.54
CopeO89079 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.65□□□□□ -0.54
CopeO89079 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Gm25700-201ENSMUST00000177693 110 ntBASIC11.65□□□□□ -0.54
CopeO89079 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
CopeO89079 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Gm9353-201ENSMUST00000200472 604 ntBASIC11.65□□□□□ -0.54
CopeO89079 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Gm13097-201ENSMUST00000210722 397 ntBASIC11.65□□□□□ -0.54
CopeO89079 Gm45865-201ENSMUST00000211815 945 ntBASIC11.65□□□□□ -0.54
CopeO89079 Cts7-204ENSMUST00000225321 1257 ntBASIC11.65□□□□□ -0.54
CopeO89079 Gm7399-201ENSMUST00000032395 858 ntBASIC11.65□□□□□ -0.54
CopeO89079 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
CopeO89079 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CopeO89079 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms