Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Hcn1O88704 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 Gm13045-201ENSMUST00000119019 712 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.88□□□□□ -0.67
Hcn1O88704 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.88□□□□□ -0.67
Hcn1O88704 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Gm6114-201ENSMUST00000182472 968 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hcn1O88704 Gm37246-201ENSMUST00000192665 835 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.88□□□□□ -0.67
Hcn1O88704 Gm43002-201ENSMUST00000200310 155 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Gm6905-201ENSMUST00000205729 511 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hcn1O88704 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hcn1O88704 Ntng1-201ENSMUST00000051253 327 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hcn1O88704 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC10.88□□□□□ -0.67
Hcn1O88704 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.88□□□□□ -0.67
Hcn1O88704 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.88□□□□□ -0.67
Hcn1O88704 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hcn1O88704 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hcn1O88704 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.87□□□□□ -0.67
Hcn1O88704 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.87□□□□□ -0.67
Hcn1O88704 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.87□□□□□ -0.67
Hcn1O88704 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hcn1O88704 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hcn1O88704 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hcn1O88704 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.87□□□□□ -0.67
Hcn1O88704 Gm20426-201ENSMUST00000173657 440 ntBASIC10.87□□□□□ -0.67
Hcn1O88704 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Hcn1O88704 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.87□□□□□ -0.67
Hcn1O88704 Gm19353-201ENSMUST00000184561 445 ntBASIC10.87□□□□□ -0.67
Hcn1O88704 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.87□□□□□ -0.67
Hcn1O88704 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.87□□□□□ -0.67
Hcn1O88704 Gm5714-201ENSMUST00000197343 566 ntBASIC10.87□□□□□ -0.67
Hcn1O88704 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.87□□□□□ -0.67
Hcn1O88704 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.87□□□□□ -0.67
Hcn1O88704 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hcn1O88704 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.87□□□□□ -0.67
Hcn1O88704 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hcn1O88704 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hcn1O88704 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms