Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
Rnf13O54965 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.26□□□□□ -0.77
Rnf13O54965 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.26□□□□□ -0.77
Rnf13O54965 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.26□□□□□ -0.77
Rnf13O54965 Gm26047-201ENSMUST00000157308 113 ntBASIC10.26□□□□□ -0.77
Rnf13O54965 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
Rnf13O54965 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.26□□□□□ -0.77
Rnf13O54965 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.26□□□□□ -0.77
Rnf13O54965 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Gm26047-202ENSMUST00000198840 115 ntBASIC10.26□□□□□ -0.77
Rnf13O54965 Gm17827-201ENSMUST00000211825 742 ntBASIC10.26□□□□□ -0.77
Rnf13O54965 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.26□□□□□ -0.77
Rnf13O54965 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.26□□□□□ -0.77
Rnf13O54965 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Rnf13O54965 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rnf13O54965 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.26□□□□□ -0.77
Rnf13O54965 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.26□□□□□ -0.77
Rnf13O54965 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Rnf13O54965 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.26□□□□□ -0.77
Rnf13O54965 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Rnf13O54965 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.26□□□□□ -0.77
Rnf13O54965 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf13O54965 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.25□□□□□ -0.77
Rnf13O54965 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.25□□□□□ -0.77
Rnf13O54965 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.25□□□□□ -0.77
Rnf13O54965 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.25□□□□□ -0.77
Rnf13O54965 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.25□□□□□ -0.77
Rnf13O54965 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.25□□□□□ -0.77
Rnf13O54965 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.25□□□□□ -0.77
Rnf13O54965 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Rnf13O54965 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Gm15276-201ENSMUST00000145953 498 ntBASIC10.25□□□□□ -0.77
Rnf13O54965 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf13O54965 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Rnf13O54965 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.25□□□□□ -0.77
Rnf13O54965 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.25□□□□□ -0.77
Rnf13O54965 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf13O54965 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.25□□□□□ -0.77
Rnf13O54965 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.25□□□□□ -0.77
Rnf13O54965 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.25□□□□□ -0.77
Rnf13O54965 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Rnf13O54965 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Rnf13O54965 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Rnf13O54965 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Rnf13O54965 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf13O54965 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.25□□□□□ -0.77
Rnf13O54965 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf13O54965 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Rnf13O54965 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Rnf13O54965 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Rnf13O54965 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms