Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.08□□□□□ -0.8
OtpO09113 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
OtpO09113 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.08□□□□□ -0.8
OtpO09113 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
OtpO09113 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
OtpO09113 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
OtpO09113 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
OtpO09113 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
OtpO09113 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
OtpO09113 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.08□□□□□ -0.8
OtpO09113 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
OtpO09113 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
OtpO09113 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.07□□□□□ -0.8
OtpO09113 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Btrc-209ENSMUST00000224478 2194 ntBASIC10.07□□□□□ -0.8
OtpO09113 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
OtpO09113 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
OtpO09113 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
OtpO09113 Gm14724-201ENSMUST00000118400 537 ntBASIC10.07□□□□□ -0.8
OtpO09113 Gm12217-201ENSMUST00000118858 696 ntBASIC10.07□□□□□ -0.8
OtpO09113 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
OtpO09113 Gm15566-201ENSMUST00000121130 590 ntBASIC10.07□□□□□ -0.8
OtpO09113 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.07□□□□□ -0.8
OtpO09113 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.07□□□□□ -0.8
OtpO09113 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
OtpO09113 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.07□□□□□ -0.8
OtpO09113 Gm2965-201ENSMUST00000198365 343 ntBASIC10.07□□□□□ -0.8
OtpO09113 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
OtpO09113 Gm7504-201ENSMUST00000201449 424 ntBASIC10.07□□□□□ -0.8
OtpO09113 Gm43966-201ENSMUST00000203301 612 ntBASIC10.07□□□□□ -0.8
OtpO09113 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Gm44008-201ENSMUST00000204345 412 ntBASIC10.07□□□□□ -0.8
OtpO09113 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.07□□□□□ -0.8
OtpO09113 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.07□□□□□ -0.8
OtpO09113 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.07□□□□□ -0.8
OtpO09113 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
OtpO09113 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
OtpO09113 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
OtpO09113 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
OtpO09113 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
OtpO09113 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
OtpO09113 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
OtpO09113 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
OtpO09113 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
OtpO09113 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.06□□□□□ -0.8
OtpO09113 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
OtpO09113 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
OtpO09113 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
OtpO09113 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
OtpO09113 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Gm8731-201ENSMUST00000118088 412 ntBASIC10.06□□□□□ -0.8
OtpO09113 Gm15595-201ENSMUST00000120840 961 ntBASIC10.06□□□□□ -0.8
OtpO09113 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.06□□□□□ -0.8
OtpO09113 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.06□□□□□ -0.8
OtpO09113 Gm17040-202ENSMUST00000170597 889 ntBASIC10.06□□□□□ -0.8
OtpO09113 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.06□□□□□ -0.8
OtpO09113 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.06□□□□□ -0.8
OtpO09113 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
OtpO09113 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
OtpO09113 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms