Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Brpf3B2KF05 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brpf3B2KF05 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brpf3B2KF05 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brpf3B2KF05 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Brpf3B2KF05 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Brpf3B2KF05 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brpf3B2KF05 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Brpf3B2KF05 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brpf3B2KF05 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Brpf3B2KF05 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brpf3B2KF05 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Brpf3B2KF05 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.56□□□□□ -0.4
Brpf3B2KF05 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Gm29396-201ENSMUST00000185659 716 ntBASIC12.56□□□□□ -0.4
Brpf3B2KF05 Gm28923-201ENSMUST00000187755 322 ntBASIC12.56□□□□□ -0.4
Brpf3B2KF05 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.56□□□□□ -0.4
Brpf3B2KF05 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Gm45880-201ENSMUST00000213041 853 ntBASIC12.56□□□□□ -0.4
Brpf3B2KF05 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.56□□□□□ -0.4
Brpf3B2KF05 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Brpf3B2KF05 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Brpf3B2KF05 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Gm28693-201ENSMUST00000189622 2638 ntBASIC12.55□□□□□ -0.4
Brpf3B2KF05 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.55□□□□□ -0.4
Brpf3B2KF05 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Gm5745-201ENSMUST00000183748 313 ntBASIC12.55□□□□□ -0.4
Brpf3B2KF05 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.55□□□□□ -0.4
Brpf3B2KF05 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.55□□□□□ -0.4
Brpf3B2KF05 Gm40332-201ENSMUST00000199847 938 ntBASIC12.55□□□□□ -0.4
Brpf3B2KF05 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Olfr284-202ENSMUST00000206647 966 ntBASIC12.55□□□□□ -0.4
Brpf3B2KF05 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.55□□□□□ -0.4
Brpf3B2KF05 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.55□□□□□ -0.4
Brpf3B2KF05 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.55□□□□□ -0.4
Brpf3B2KF05 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Gm45089-201ENSMUST00000208082 2040 ntBASIC12.55□□□□□ -0.4
Brpf3B2KF05 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC12.55□□□□□ -0.4
Brpf3B2KF05 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.55□□□□□ -0.4
Brpf3B2KF05 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Brpf3B2KF05 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brpf3B2KF05 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Brpf3B2KF05 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Brpf3B2KF05 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brpf3B2KF05 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brpf3B2KF05 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brpf3B2KF05 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brpf3B2KF05 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brpf3B2KF05 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brpf3B2KF05 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Brpf3B2KF05 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms