Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm42840-201ENSMUST00000200303 2251 ntBASIC5.8□□□□□ -1.48
Ubr4A2AN08 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ubr4A2AN08 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ubr4A2AN08 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm11517-201ENSMUST00000119491 387 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm28179-201ENSMUST00000188365 613 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm7539-201ENSMUST00000189789 630 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm44388-201ENSMUST00000204350 258 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Rcvrn-201ENSMUST00000021290 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm18226-201ENSMUST00000215261 521 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Figla-201ENSMUST00000032070 759 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm28323-201ENSMUST00000186817 2499 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm5472-201ENSMUST00000178604 1678 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Rasgrp1-203ENSMUST00000172901 1903 ntTSL 5 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm9670-201ENSMUST00000121201 540 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm26035-201ENSMUST00000083065 308 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 AC149588.2-201ENSMUST00000228182 1859 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm43165-201ENSMUST00000200842 1635 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 n-R5s90-201ENSMUST00000103968 118 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Vmn1r-ps147-201ENSMUST00000177028 513 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm2981-201ENSMUST00000213947 694 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Rpl14-ps1-201ENSMUST00000026901 653 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm14584-201ENSMUST00000118956 637 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm28381-201ENSMUST00000188403 193 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm37944-201ENSMUST00000194233 414 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm45566-201ENSMUST00000209883 1168 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm46189-201ENSMUST00000219395 644 ntTSL 3 BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm10020-201ENSMUST00000081993 612 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC5.79□□□□□ -1.48
Ubr4A2AN08 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ubr4A2AN08 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms