Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm14130-201ENSMUST00000118417 987 ntBASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm9899-201ENSMUST00000065519 555 ntBASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H2afb3S4R1G7 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Gm22323-201ENSMUST00000103832 109 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Gm15198-201ENSMUST00000117283 177 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Gm12857-201ENSMUST00000117678 592 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Gm3332-201ENSMUST00000189337 928 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
H2afb3S4R1G7 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms