Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm13035-201ENSMUST00000117496 342 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm11783-201ENSMUST00000119549 885 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm23699-201ENSMUST00000158835 135 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Mir3102-201ENSMUST00000175555 104 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm45575-201ENSMUST00000210283 548 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm10288-201ENSMUST00000084614 537 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm21811-201ENSMUST00000096485 930 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sec61a2Q9JLR1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Gm20426-201ENSMUST00000173657 440 ntBASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Mir8093-201ENSMUST00000185043 137 ntBASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Gm37246-201ENSMUST00000192665 835 ntBASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Lect2-202ENSMUST00000225183 823 ntBASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Gm8420-201ENSMUST00000097103 598 ntBASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.24□□□□□ -0.77
Sec61a2Q9JLR1 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a2Q9JLR1 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a2Q9JLR1 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.23□□□□□ -0.77
Sec61a2Q9JLR1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a2Q9JLR1 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a2Q9JLR1 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sec61a2Q9JLR1 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Sec61a2Q9JLR1 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms