Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Gm18065-201ENSMUST00000221395 526 ntBASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chmp4cQ9D7F7 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Mir877-201ENSMUST00000104738 85 ntBASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Gm25881-201ENSMUST00000157783 103 ntBASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 CT025681.1-201ENSMUST00000225453 1855 ntBASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp4cQ9D7F7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 CT009713.5-203ENSMUST00000224218 2079 ntBASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Gm15515-201ENSMUST00000117827 822 ntBASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Gm38151-201ENSMUST00000195085 289 ntBASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Chmp4cQ9D7F7 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chmp4cQ9D7F7 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms