Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm20414-201ENSMUST00000172918 646 ntBASIC10.01□□□□□ -0.81
Scrt1Q99M85 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gm26134-201ENSMUST00000178484 110 ntBASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.01□□□□□ -0.81
Scrt1Q99M85 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Scrt1Q99M85 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Scrt1Q99M85 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Scrt1Q99M85 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm11578-201ENSMUST00000118530 459 ntBASIC10□□□□□ -0.81
Scrt1Q99M85 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10□□□□□ -0.81
Scrt1Q99M85 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10□□□□□ -0.81
Scrt1Q99M85 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm42816-201ENSMUST00000198433 325 ntBASIC10□□□□□ -0.81
Scrt1Q99M85 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 AC098716.1-201ENSMUST00000213527 703 ntBASIC10□□□□□ -0.81
Scrt1Q99M85 AC112945.1-201ENSMUST00000226413 514 ntBASIC10□□□□□ -0.81
Scrt1Q99M85 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC10□□□□□ -0.81
Scrt1Q99M85 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm43963-201ENSMUST00000203466 2488 ntBASIC10□□□□□ -0.81
Scrt1Q99M85 Gm37348-201ENSMUST00000193104 1789 ntBASIC10□□□□□ -0.81
Scrt1Q99M85 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm7642-201ENSMUST00000216345 1809 ntBASIC10□□□□□ -0.81
Scrt1Q99M85 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10□□□□□ -0.81
Scrt1Q99M85 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Scrt1Q99M85 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Scrt1Q99M85 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Gm5434-202ENSMUST00000222384 1451 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Gm5434-201ENSMUST00000071825 1451 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Gm5641-201ENSMUST00000091130 1488 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Gm11783-201ENSMUST00000119549 885 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scrt1Q99M85 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.99□□□□□ -0.81
Scrt1Q99M85 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Scrt1Q99M85 AC114645.1-201ENSMUST00000215831 187 ntBASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms