Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Usp11Q99K46 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.98□□□□□ -0.49
Usp11Q99K46 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Usp11Q99K46 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Usp11Q99K46 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Usp11Q99K46 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Usp11Q99K46 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Usp11Q99K46 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Gm24891-201ENSMUST00000104391 136 ntBASIC11.97□□□□□ -0.49
Usp11Q99K46 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Gm15207-201ENSMUST00000119259 442 ntBASIC11.97□□□□□ -0.49
Usp11Q99K46 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.97□□□□□ -0.49
Usp11Q99K46 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.97□□□□□ -0.49
Usp11Q99K46 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.97□□□□□ -0.49
Usp11Q99K46 Gm26461-201ENSMUST00000175064 290 ntBASIC11.97□□□□□ -0.49
Usp11Q99K46 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Usp11Q99K46 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.97□□□□□ -0.49
Usp11Q99K46 Gm6450-201ENSMUST00000200896 574 ntBASIC11.97□□□□□ -0.49
Usp11Q99K46 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Gm8420-201ENSMUST00000097103 598 ntBASIC11.97□□□□□ -0.49
Usp11Q99K46 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.97□□□□□ -0.49
Usp11Q99K46 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Usp11Q99K46 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.96□□□□□ -0.49
Usp11Q99K46 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.96□□□□□ -0.49
Usp11Q99K46 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Gm7851-201ENSMUST00000117574 323 ntBASIC11.96□□□□□ -0.49
Usp11Q99K46 Gm11941-201ENSMUST00000119904 610 ntBASIC11.96□□□□□ -0.49
Usp11Q99K46 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.96□□□□□ -0.49
Usp11Q99K46 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.96□□□□□ -0.49
Usp11Q99K46 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.96□□□□□ -0.49
Usp11Q99K46 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Usp11Q99K46 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Usp11Q99K46 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Usp11Q99K46 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Usp11Q99K46 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms