Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdk9Q99J95 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdk9Q99J95 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cdk9Q99J95 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cdk9Q99J95 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdk9Q99J95 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdk9Q99J95 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.44□□□□□ -0.58
Cdk9Q99J95 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdk9Q99J95 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cdk9Q99J95 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.43□□□□□ -0.58
Cdk9Q99J95 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.43□□□□□ -0.58
Cdk9Q99J95 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdk9Q99J95 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdk9Q99J95 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.42□□□□□ -0.58
Cdk9Q99J95 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.42□□□□□ -0.58
Cdk9Q99J95 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Nln-205ENSMUST00000224945 2486 ntBASIC11.42□□□□□ -0.58
Cdk9Q99J95 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.42□□□□□ -0.58
Cdk9Q99J95 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.42□□□□□ -0.58
Cdk9Q99J95 Gm9230-201ENSMUST00000188228 532 ntBASIC11.42□□□□□ -0.58
Cdk9Q99J95 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.42□□□□□ -0.58
Cdk9Q99J95 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.42□□□□□ -0.58
Cdk9Q99J95 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.42□□□□□ -0.58
Cdk9Q99J95 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.42□□□□□ -0.58
Cdk9Q99J95 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdk9Q99J95 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdk9Q99J95 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms