Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Gm4726-201ENSMUST00000135604 736 ntBASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Gm6019-201ENSMUST00000148369 736 ntBASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Mir1943-201ENSMUST00000158276 73 ntBASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Gm22711-201ENSMUST00000116890 133 ntBASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Gm8459-201ENSMUST00000162504 760 ntBASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Mir6546-201ENSMUST00000184460 62 ntBASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Gm2517-201ENSMUST00000215651 348 ntBASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdha3Q91Y16 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdha3Q91Y16 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdha3Q91Y16 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdha3Q91Y16 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdha3Q91Y16 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdha3Q91Y16 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdha3Q91Y16 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm15573-201ENSMUST00000119487 540 ntBASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm11956-201ENSMUST00000119525 512 ntBASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm6439-201ENSMUST00000199849 862 ntBASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm8342-201ENSMUST00000209839 757 ntBASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm9132-201ENSMUST00000210182 832 ntBASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdha3Q91Y16 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms