Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb17Q91VD8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb17Q91VD8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb17Q91VD8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb17Q91VD8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb17Q91VD8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhb17Q91VD8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhb17Q91VD8 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.63□□□□□ -0.39
Pcdhb17Q91VD8 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.63□□□□□ -0.39
Pcdhb17Q91VD8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhb17Q91VD8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Mobp-201ENSMUST00000068698 1536 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm38014-201ENSMUST00000193349 2612 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm15808-201ENSMUST00000119046 604 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm11350-201ENSMUST00000121436 870 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm14006-201ENSMUST00000122132 981 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm24382-201ENSMUST00000122698 107 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm25700-201ENSMUST00000177693 110 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm4822-201ENSMUST00000077551 479 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Tctex1d2-202ENSMUST00000080316 720 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.62□□□□□ -0.39
Pcdhb17Q91VD8 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Gm15236-201ENSMUST00000117309 379 ntBASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Gm13296-201ENSMUST00000117854 997 ntBASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 3110056K07Rik-201ENSMUST00000127129 722 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdhb17Q91VD8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms