Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm8459-201ENSMUST00000162504 760 ntBASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm29499-201ENSMUST00000189151 486 ntBASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm28329-201ENSMUST00000191208 689 ntBASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm29171-201ENSMUST00000191397 486 ntBASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 CT573034.1-201ENSMUST00000222983 313 ntBASIC9.51□□□□□ -0.89
H1fooQ8VIK3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
H1fooQ8VIK3 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
H1fooQ8VIK3 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
H1fooQ8VIK3 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
H1fooQ8VIK3 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
H1fooQ8VIK3 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
H1fooQ8VIK3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
H1fooQ8VIK3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
H1fooQ8VIK3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
H1fooQ8VIK3 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
H1fooQ8VIK3 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
H1fooQ8VIK3 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms