Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.25□□□□□ -0.45
TraipQ8VIG6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TraipQ8VIG6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Gm10388-201ENSMUST00000205001 2936 ntBASIC12.24□□□□□ -0.45
TraipQ8VIG6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Olfml3-204ENSMUST00000169286 874 ntBASIC12.24□□□□□ -0.45
TraipQ8VIG6 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.24□□□□□ -0.45
TraipQ8VIG6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.24□□□□□ -0.45
TraipQ8VIG6 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 AC172027.1-201ENSMUST00000217659 337 ntBASIC12.24□□□□□ -0.45
TraipQ8VIG6 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.24□□□□□ -0.45
TraipQ8VIG6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TraipQ8VIG6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.23□□□□□ -0.45
TraipQ8VIG6 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gm12400-201ENSMUST00000120915 1003 ntBASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gm19246-201ENSMUST00000173599 255 ntBASIC12.23□□□□□ -0.45
TraipQ8VIG6 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gm43002-201ENSMUST00000200310 155 ntBASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gm43380-201ENSMUST00000200421 220 ntBASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.23□□□□□ -0.45
TraipQ8VIG6 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.23□□□□□ -0.45
TraipQ8VIG6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Exosc10-201ENSMUST00000017408 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TraipQ8VIG6 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms