Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm22144-201ENSMUST00000157402 102 ntBASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Lect2-202ENSMUST00000225183 823 ntBASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfwd3Q8CIK8 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rfwd3Q8CIK8 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Rfwd3Q8CIK8 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.7
Rfwd3Q8CIK8 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Gm20495-201ENSMUST00000173902 235 ntBASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Rfwd3Q8CIK8 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm13611-201ENSMUST00000118269 318 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms