Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Gm17980-201ENSMUST00000217977 2349 ntBASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Gm12501-201ENSMUST00000119163 529 ntBASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Gm14017-201ENSMUST00000121934 386 ntBASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Gm17040-202ENSMUST00000170597 889 ntBASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Gm5733-201ENSMUST00000190232 939 ntBASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Gm18212-201ENSMUST00000211678 889 ntBASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc38Q8CDN8 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccdc38Q8CDN8 Gm12266-201ENSMUST00000120311 962 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms