Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Gm43058-201ENSMUST00000197645 625 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim9Q8C7M3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Gm10051-201ENSMUST00000145209 414 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Mir6546-201ENSMUST00000184460 62 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Gm37466-201ENSMUST00000195692 652 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Gm5451-201ENSMUST00000080545 579 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim9Q8C7M3 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm23272-201ENSMUST00000104053 129 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm11949-201ENSMUST00000117640 372 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm15573-201ENSMUST00000119487 540 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm16219-201ENSMUST00000120096 274 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm14395-201ENSMUST00000120494 563 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm8737-201ENSMUST00000122208 642 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm19246-201ENSMUST00000173599 255 ntBASIC12.48□□□□□ -0.41
Trim9Q8C7M3 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms