Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Scube3Q66PY1 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scube3Q66PY1 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scube3Q66PY1 Gm18367-201ENSMUST00000176139 600 ntBASIC12.21□□□□□ -0.45
Scube3Q66PY1 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC12.21□□□□□ -0.45
Scube3Q66PY1 Gm9211-201ENSMUST00000182882 975 ntBASIC12.21□□□□□ -0.45
Scube3Q66PY1 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scube3Q66PY1 Gm43761-201ENSMUST00000202132 991 ntBASIC12.21□□□□□ -0.45
Scube3Q66PY1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scube3Q66PY1 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scube3Q66PY1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scube3Q66PY1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scube3Q66PY1 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Scube3Q66PY1 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Scube3Q66PY1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Scube3Q66PY1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Scube3Q66PY1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scube3Q66PY1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scube3Q66PY1 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Scube3Q66PY1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scube3Q66PY1 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scube3Q66PY1 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scube3Q66PY1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm22711-201ENSMUST00000116890 133 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm15161-201ENSMUST00000117340 387 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm15573-201ENSMUST00000119487 540 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm4726-201ENSMUST00000135604 736 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm6019-201ENSMUST00000148369 736 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm16147-201ENSMUST00000162143 373 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Mir6546-201ENSMUST00000184460 62 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm8480-201ENSMUST00000190350 698 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm21089-201ENSMUST00000215843 325 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.2□□□□□ -0.46
Scube3Q66PY1 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Scube3Q66PY1 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Scube3Q66PY1 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.19□□□□□ -0.46
Scube3Q66PY1 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Gm14071-201ENSMUST00000117817 509 ntBASIC12.19□□□□□ -0.46
Scube3Q66PY1 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.19□□□□□ -0.46
Scube3Q66PY1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.19□□□□□ -0.46
Scube3Q66PY1 Gm12407-201ENSMUST00000180219 324 ntBASIC12.19□□□□□ -0.46
Scube3Q66PY1 Gm27039-201ENSMUST00000182438 962 ntBASIC12.19□□□□□ -0.46
Scube3Q66PY1 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.19□□□□□ -0.46
Scube3Q66PY1 Gm44506-201ENSMUST00000206278 965 ntBASIC12.19□□□□□ -0.46
Scube3Q66PY1 Gm45118-201ENSMUST00000208928 825 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms