Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm45308-201ENSMUST00000210610 415 ntBASIC10.34□□□□□ -0.75
VcanQ62059 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC10.34□□□□□ -0.75
VcanQ62059 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.33□□□□□ -0.76
VcanQ62059 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.33□□□□□ -0.76
VcanQ62059 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Gm27383-201ENSMUST00000184418 361 ntBASIC10.33□□□□□ -0.76
VcanQ62059 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC10.33□□□□□ -0.76
VcanQ62059 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC10.33□□□□□ -0.76
VcanQ62059 Gm18862-201ENSMUST00000204643 933 ntBASIC10.33□□□□□ -0.76
VcanQ62059 Gm44640-201ENSMUST00000206894 247 ntBASIC10.33□□□□□ -0.76
VcanQ62059 Gm10238-201ENSMUST00000089689 408 ntBASIC10.33□□□□□ -0.76
VcanQ62059 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.33□□□□□ -0.76
VcanQ62059 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.33□□□□□ -0.76
VcanQ62059 Gm37036-201ENSMUST00000192836 2506 ntBASIC10.33□□□□□ -0.76
VcanQ62059 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
VcanQ62059 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Gm23563-201ENSMUST00000174900 251 ntBASIC10.33□□□□□ -0.76
VcanQ62059 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Gm44460-201ENSMUST00000196179 129 ntBASIC10.33□□□□□ -0.76
VcanQ62059 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC10.33□□□□□ -0.76
VcanQ62059 AC159899.1-201ENSMUST00000214024 733 ntBASIC10.33□□□□□ -0.76
VcanQ62059 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
VcanQ62059 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Gm10461-201ENSMUST00000202073 4786 ntBASIC10.33□□□□□ -0.76
VcanQ62059 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.33□□□□□ -0.76
VcanQ62059 Car13-201ENSMUST00000029071 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Gm45110-201ENSMUST00000205704 1402 ntBASIC10.33□□□□□ -0.76
VcanQ62059 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.33□□□□□ -0.76
VcanQ62059 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
VcanQ62059 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Gm14676-201ENSMUST00000117722 858 ntBASIC10.32□□□□□ -0.76
VcanQ62059 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
VcanQ62059 Gm8525-201ENSMUST00000189674 861 ntBASIC10.32□□□□□ -0.76
VcanQ62059 Gm34248-201ENSMUST00000200027 474 ntBASIC10.32□□□□□ -0.76
VcanQ62059 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Gm20474-201ENSMUST00000180089 596 ntBASIC10.32□□□□□ -0.76
VcanQ62059 Gm6114-201ENSMUST00000182472 968 ntBASIC10.32□□□□□ -0.76
VcanQ62059 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.32□□□□□ -0.76
VcanQ62059 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
VcanQ62059 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
VcanQ62059 Gm2492-201ENSMUST00000221355 1394 ntBASIC10.32□□□□□ -0.76
VcanQ62059 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.32□□□□□ -0.76
VcanQ62059 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
VcanQ62059 Gm16439-201ENSMUST00000100687 564 ntBASIC10.32□□□□□ -0.76
VcanQ62059 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC10.32□□□□□ -0.76
VcanQ62059 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC10.32□□□□□ -0.76
VcanQ62059 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
VcanQ62059 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
VcanQ62059 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
VcanQ62059 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.32□□□□□ -0.76
VcanQ62059 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VcanQ62059 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms